User:Greg

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Greg Bokinsky

Image:GEB_barcelona.jpg


bokinsky at berkeley dot edu


Education

Harvard University

PhD, Chemistry (2007)

Thesis: Single molecule fluorescence studies of RNA folding and protein-nucleic acid assembly

Zhuang Group


Swarthmore College

BA, Biochemistry (2000)



Publications

E. Abbondanzieri*, G. Bokinsky*, J. Rausch, J. Zhang, S. Le Grice, X. Zhuang. Dynamic binding orientations determine the enzymatic activity of HIV reverse transcriptase. In press. *Contributed equally to this work.

S. Liu, G. Bokinsky, N. Walter, X. Zhuang. Dissecting the multistep reaction pathway of an RNA enzyme by single-molecule kinetic “fingerprinting.” Proc. Natl. Acad. Sci. USA 104, 12634-12639 (2007). PDF

G. Bokinsky, L. Nivón, S. Liu, G. Chai, M. Hong, K. M. Weeks, X. Zhuang. Two distinct binding modes of a protein cofactor with its target RNA. Journal of Molecular Biology, 361: 771-784 (2006). PDF

G. Bokinsky, X. Zhuang. Single-molecule RNA folding. Accounts of Chemical Research 38: 566-573 (2005). PDF

D. Rueda*, G. Bokinsky*, M. Rhodes, M. Rust, X. Zhuang, N. Walter. Single-molecule enzymology of RNA: Essential functional groups impact catalysis from a distance. Proc. Natl. Acad. Sci. USA 101: 10066-10071 (2004). *Contributed equally to this work. PDF

G. Bokinsky, D. Rueda, V. Misra, A. Gordus, M. Rhodes, H. Babcock, N. Walter, X. Zhuang. Single-molecule transition-state analysis of RNA folding. Proc. Natl. Acad. Sci. USA 100: 9302-9307 (2003). PDF

P. Kehayova, G. Bokinsky, J. Huber, A. Jain. A caged hydrophobic inhibitor of carbonic anhydrase II. Organic Letters 1, 2: 187-188 (1999).